SimPlot Contents
Overview
SimPlot Help main window
SimPlot Features
System requirements
Background
Installation
Version history
Known problems and Plans
Contact the author
Quick Start Guide
Loading sequence data
Organizing sequence data
Setting up FindSites
Similarity/Diversity plotting
Setting and Manipulating Marks
Bootscanning
FindSites: Informative Sites analysis
Incremental interpolation
Pitfalls
Pitfalls
Miscellaneous topics
Save slice of alignment
QuickTree and QuickBootstrap
SimPlot time stamp
Mark Positions